Browse of TCMCG006C77398 protein

CDS

Accession Number	TCMCG006C77398
gbkey	CDS
Protein Id	XP_013697171.1
Location	complement(join(37354640..37354681,37354774..37354851,37354959..37355033,37355126..37355242,37355332..37355415,37355829..37355894,37356007..37356072,37356207..37356278,37356365..37356466,37356557..37356734,37356804..37356859,37357001..37357108,37357189..37357257,37357344..37357452,37357670..37357758,37357874..37357951,37358327..37358449,37358754..37358873,37358979..37359059,37359143..37359289,37359379..37359457,37359848..37359922,37360189..37360298,37360418..37360516,37360729..37360844,37360956..37361064,37361142..37361360,37361458..37361723,37362022..37362179,37362283..37362430,37362570..37362633,37362910..37362939))
Gene	LOC106401244
GeneID	106401244
Organism	Brassica napus

Protein

Length	1110aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013841717.2
Definition	ubiquitin carboxyl-terminal hydrolase 13-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTATGATAACCCCGCCGCCGCTCGATCAAGAGGACGTGGAGATGCTGGTTCCGCATTCTGATGTAGTCGAGGGACCTCAGCCCATGGAAGTTGCTCAACTCGAGGCTGCTGCTGCTGTGGAGAATCCGCCAGCGGAGGAACCTCCCTCTGTGAAGTTCACGTGGCTTATCCCAGGTTTCACGAGGCTGAACACCAGGAAGCACTACTCTGATGTTTTTGTTGCTGGAGGTTATAAATGGCGAGTATTGATTTTTCCGAAAGGAAACAATGTGGACCATTTGGCCATGTACTTGGATGTTGCTGACGCTGCGAGTTTGCCATACGGGTGGTGTAGGTATTCACATTTCGGCCTGACTGTAGTGAATCAAATCAACAACAGATATTCCGTGAGAAAAGAGACCCAACATCAATTCAATGCAAGAGAAAGCGATTGGGGGTTTACATCATTCATGCCTCTCGGCGAGCTCTACGATCCCACTCGTGGATATTTGGTTAATGATACTGTTCTGATTGAAGCTGAAGTTTCTGTGCGGAAGGTTCTTGATTACTGGGCATATGACTCAAAAAAAGAGACGGGTTTTGTTGGACTTAAGAACCAAGGTGCTACCTGTTACATGAATTCTCTCCTGGAGACCTTGTACCACATACCCTACTTCAGAAAGGCTGTTTACCATATGCCAACAACTGAGAATGATGCACCTACGGCGAGCATCCCATTGGCGCTCCAGAGTTTGTTTTACAAACTTCAGTATAATGACACCAGTGTAGCGACAAAGGAGCTGACAAAGTCGTTTGGCTGGGATACATATGATTCGTTCATGCAACATGATGTTCAAGAACTCAACCGAGTTCTCTGTGAAAAGCTCGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAGAAGTTATTTGAGGGTCACCAAATGAATTACATTGAGTGCATTAATGTAGATTACAAATCCACTCGGAAAGAATCATTCTATGACCTCCAGCTTGATGTTAAAGGCTGCAAAGATGTATATGCTTCTTTTGACAAGTATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATACCATGCAGAAGGACATGATTTGCAGGATGCAAAAAAAGGTGTTCTGTTTATGGACTTTCCACCCGTACTTCAACTTCAGCTCAAGAGGTTTGAATATGATTTTATGCGAGACATAATGGTGAAGATAAATGATCGATACGAGTTTCCTCTTCAACTGGATCTCGACCGAGAGAATGGAAAATATTTATCCCCTGATGCTGACAAGAGTGTCCGTAACCTCTATACACTCCATAGTGTCCTAGTTCATAGTGGTGGAGTTAATGGAGGGCACTATTATGCTTATATCAGACCAACACTCTCAGACCAGTGGTATAAATTTGATGATGAACGGGTGACAAAGGAAGATGTGAATAGGGTACTGGAAGAGCAATATGGTGGCGAAGAAGAGTTACCACAGAATAATCCTGGTTTCAACAATCCACCTTTTAAATTCACAAAGTACTCGAACGCATACATGCTTGTTTATATCCGGGAAAGCGACAAGGATAAAATAATATGCAACGTTGATGAAAAAGACGTCGCCGAACATTTACGGGTGAGGCTGAAAAAAGAACAAGAAGAGAAAGAAGATAAAAGAAAATACAAGGCTGAAGCTCACCTTTTCACGACAGTCAAGGTCGCAAGAGATGAAGACATCACAGAGCAAATTGGAAAGAATATGTACTTTGATCTTGTTGATCATGAAAAAGTCAAGAGTTTTCGAATCGAGAAACAGACCCCCTTTCTGCTTTTTAAGGAAGAGGTGGCCAAAGAATTTGGTGTCCCTGTTGAGCTGCAGCGGTTCTGGATTTGGGCAAAGCGGCAAAACCATACTTATCGTCCCAACCGCCCCTTGTTATCCCATGAAGAATTACAGATGGTTGGACATATAAGAGAGGCATCAAACAAGGCAAACAATGCTGAGCTAAAGCTGTTTCTGGAAATTGTGCGTGGACCGGATGAGCGTCCTATTCCTCCCCCAGCCAAGTCATTTGAAGATATTCTTCTTTTCTTTAAGCTCTATGACCCTGAGAATGGAGTACTAAGATATGTTGGCAGGCTCATGGTGAAAAACTCCAGTAAGCCCATGGATATAATAGGGGAATTGATTCAAATGGCTGGCTTTGCTCCTGATGAGGAAATAGAACTTTTTGAGGAAATAAAGTTTCAACCTTGTGTAATGTGCGAACATCTGGATAAGAATACGTCTTTTAAACTATCTCAAATTGAAGATGGTGATATCATTTGCTATCAGAAAGCTCTTTCTATCCAGGAGAATGAATGTCCATACCCGGATGTGCCATCGTTTTTGGAGTATGTACAGAATCGAGAGGTGGTGCGTTTTCGTACTCTGGAAAAACCAAAAGATGATCAGTTTACTATGGAGTTGTCAAAGTTGCACTCATATGACGATGTTGTGGATAGATTGGCTGAGAAGATTGGCCTTGATGATTCATCGAAAATTAGGCTTACTCCTCACAATTGCTACTCCCAGCAACCCAAGCCTCAGCCTATTAAATACCGTGGAGTTGACCATCTATCAGACATGTTAGCTCACTATAATCAGACGTCTGACATTTTGTATTACGAAGTTTTGGACATTCCTCTACCAGAATTGCAAGGTCTTAAGATTCTAAATGTAGCTTTTCATCATGCTTCAAAGGACGAAGTGATAATTCACACTATCAGACTGCCTAAGCAGAGTACTGTGGGAGATGTTATTAACGAGCTTAAAACAAAGGTGGAGCTTTCACATCAAGATGCAGAATTGAGGTTGCTTGAGGTGTTTTCCCACAAAATCTACAAGACCTTTGTATCTACCGAAAGAATTGAGAGTATCAATGACCATTACTGGACTTTACTAGCAGAGGAGATACCTGAGGAAGAGAAGAATATTGGTCCCAATGCTCGGTTAATCCATGTGTACCATTTTACTAAAGAGTCTGGACAAAATCAGCAAGTTCATAATTTCGGGGACCCCTTCGTTTTGGTGATCCACGAAGGTGAAACTTTGGAAGAAATCAAGACCCGCATCCAAAAGAAACTTCATGTACCTGATGAGGACTTTGCCAAGTGGAAGTTTGCTTTTTTCTCAACGGGACGCCCCGACTACTTGCAGGACACAGATGTTGTTTACAATCGCTTTCAGAGAAAGGATGTATATGGTGCGTGGGAGCAGTATCTTGGGTTGGAGCACGTTGATAATGCTCCTAAAAGGGCTTATCATAACCGGCACGCATATGAGAAGCCGGTGAAAATATATAATTAG

Protein:   MTMITPPPLDQEDVEMLVPHSDVVEGPQPMEVAQLEAAAAVENPPAEEPPSVKFTWLIPGFTRLNTRKHYSDVFVAGGYKWRVLIFPKGNNVDHLAMYLDVADAASLPYGWCRYSHFGLTVVNQINNRYSVRKETQHQFNARESDWGFTSFMPLGELYDPTRGYLVNDTVLIEAEVSVRKVLDYWAYDSKKETGFVGLKNQGATCYMNSLLETLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQKLFEGHQMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHDLQDAKKGVLFMDFPPVLQLQLKRFEYDFMRDIMVKINDRYEFPLQLDLDRENGKYLSPDADKSVRNLYTLHSVLVHSGGVNGGHYYAYIRPTLSDQWYKFDDERVTKEDVNRVLEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDVAEHLRVRLKKEQEEKEDKRKYKAEAHLFTTVKVARDEDITEQIGKNMYFDLVDHEKVKSFRIEKQTPFLLFKEEVAKEFGVPVELQRFWIWAKRQNHTYRPNRPLLSHEELQMVGHIREASNKANNAELKLFLEIVRGPDERPIPPPAKSFEDILLFFKLYDPENGVLRYVGRLMVKNSSKPMDIIGELIQMAGFAPDEEIELFEEIKFQPCVMCEHLDKNTSFKLSQIEDGDIICYQKALSIQENECPYPDVPSFLEYVQNREVVRFRTLEKPKDDQFTMELSKLHSYDDVVDRLAEKIGLDDSSKIRLTPHNCYSQQPKPQPIKYRGVDHLSDMLAHYNQTSDILYYEVLDIPLPELQGLKILNVAFHHASKDEVIIHTIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFSHKIYKTFVSTERIESINDHYWTLLAEEIPEEEKNIGPNARLIHVYHFTKESGQNQQVHNFGDPFVLVIHEGETLEEIKTRIQKKLHVPDEDFAKWKFAFFSTGRPDYLQDTDVVYNRFQRKDVYGAWEQYLGLEHVDNAPKRAYHNRHAYEKPVKIYN